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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119746694_119760483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119746694 - 119760483

Intron Length:

13790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCAGCCCTCACT

Flanking Amino Acid:

EREASPKPMKRSQSVVEAGT

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

86.9

0.83

0.8

84.6

30.4

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

45.9

-0.2

2.2

62.1

47.2

Associated Gene:

Gene:

CLVS1

Ensembl Gene ID:

ENSAPLG00000006781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007027

119668100 - 119760571

92472