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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119831252_119831762_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
119831252 - 119831762

Intron Length:
511

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGTAAA

5'SS Class:
major

3'SS Sequence:
ATTTTTATTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTACTAGAATT

Flanking Amino Acid:
ERTVSDPEAPGDAELMLEDA

Intron Amino Acid Position:
317

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
77.1
32.8

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
76.7
0.6
1.1
80.9
35.1

Minor 5ss
37.5
-1.4
2.4
42.6
44.3

Minor BPS
55.3
0.25
1.7
78.73
37.3

Associated Gene:

Gene:
ASPH

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

119818252 - 119875014
56763

119765829 - 119875014
109186

119818252 - 119875477
57226

119765829 - 119875014
109186

119764893 - 119862587
97695

119818252 - 119869947
51696