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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119836681_119843498_R


Intron Information:

Intron Rank:
4

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
119836681 - 119843498

Intron Length:
6818

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTTAA

5'SS Class:
major

3'SS Sequence:
CTGAAAAATGCAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTATAAC

U12 Branch Point Sequence:
AACTTTATAACT

Flanking Amino Acid:
GVAKKKTKVKGLKERSVPEQ

Intron Amino Acid Position:
94

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1
73.2
33.8

Major BPS
77.9
0.69
1
78.3
31.3

Major PPT
57.2
0.16
1.1
48.7
42.8

Minor 5ss
38.5
-1.3
3
49.6
46.6

Minor BPS
57.7
0.32
1.6
71.86
39.1

Associated Gene:

Gene:
ASPH

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

119764893 - 119862587
97695