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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12004910_12005290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12004910 - 12005290

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTGCTTGAACA

Flanking Amino Acid:

GTPSAFDRILASRMGVEAVL

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

62.7

0.4

1.6

71.68

40.8

Associated Gene:

Gene:

PFKP

Ensembl Gene ID:

ENSAPLG00000012725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019163

11985117 - 12029281

44165

ENSAPLT00000013324

11985117 - 12073414

88298

ENSAPLT00000036034

11985117 - 12073414

88298

ENSAPLT00000034198

11985117 - 12029281

44165