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Intron Name: Anas_platyrhynchos_platyrhynchos_2_120280544_120300717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120280544 - 120300717

Intron Length:

20174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

GTTGTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTGTTCATTT

Flanking Amino Acid:

ISIFMEEEDSFDFIGGLDTY

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.3

0.71

0.9

77.7

40.6

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

46.9

-0.1

2.1

70.06

41.7

Associated Gene:

Gene:

NKAIN3

Ensembl Gene ID:

ENSAPLG00000024234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021798

120108605 - 120306087

197483

ENSAPLT00000007325

119931801 - 120300872

369072