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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12031356_12032977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12031356 - 12032977

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTACAT

U12 Branch Point Sequence:

CATCACTGCAGT

Flanking Amino Acid:

VDAPIAPSDKGMDHFLYGIS

Intron Amino Acid Position:

969

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.6

32.9

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

81.9

0.72

0.9

81.2

36.5

Minor 5ss

41.8

-0.9

59.5

44.9

Minor BPS

40.1

-0.7

2.2

56.54

45.2

Associated Gene:

Gene:

PITRM1

Ensembl Gene ID:

ENSAPLG00000013443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025134

12030561 - 12059354

28794

ENSAPLT00000014055

12030561 - 12059354

28794