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Intron Name: Anas_platyrhynchos_platyrhynchos_2_120331854_120333860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120331854 - 120333860

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATACTTTTAAAA

Flanking Amino Acid:

YYIADFFVNEARKSLHRFPS

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.2

0.52

65.4

44.5

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

59.1

0.28

1.3

65.16

34.3

Associated Gene:

Gene:

GGH

Ensembl Gene ID:

ENSAPLG00000010846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033878

120329639 - 120340910

11272

ENSAPLT00000011319

120330944 - 120341134

10191