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Intron Name: Anas_platyrhynchos_platyrhynchos_2_120346022_120348640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120346022 - 120348640

Intron Length:

2619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTATGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATGT

Flanking Amino Acid:

VAKKIAAVLTDSFPLKVRGI

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

87.5

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.6

0.44

1.1

64.6

45.7

Minor 5ss

39.8

-1.1

2.8

52.2

44.4

Minor BPS

55.3

0.25

1.9

75.62

41.6

Associated Gene:

Gene:

TTPA

Ensembl Gene ID:

ENSAPLG00000025244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032252

120341893 - 120358182

16290