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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12035173_12036514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12035173 - 12036514

Intron Length:

1342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TATCTGCTAACT

Flanking Amino Acid:

CLQITRKLINDPTFKPCQMK

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

82.6

0.73

0.7

29.2

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

48.6

-0

2.3

75.2

41.1

Associated Gene:

Gene:

PITRM1

Ensembl Gene ID:

ENSAPLG00000013443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038651

12032555 - 12059354

26800

ENSAPLT00000014055

12030561 - 12059354

28794