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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12053802_12053911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12053802 - 12053911

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TAATGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTCCCGTATTA

Flanking Amino Acid:

FFPCLRQLDFWQEGWRLEHE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.4

0.68

0.9

77.3

41.3

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

51.5

0.04

2.2

72.6

39.8

Associated Gene:

Gene:

PITRM1

Ensembl Gene ID:

ENSAPLG00000013443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025134

12030561 - 12059354

28794

ENSAPLT00000014055

12030561 - 12059354

28794

ENSAPLT00000038651

12032555 - 12059354

26800