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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12080625_12081432_F

Intron Information:

Intron Rank:

132533

Intron Class:

major

Intron Phase:

Intron Coordinates:

12080625 - 12081432

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTGATTATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

70.3

40.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

36.6

-1.5

3.4

54.8

43.5

Minor BPS

54.6

0.22

1.6

72.74

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017428

12080473 - 12082335

1863