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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12081576_12081925_F

Intron Information:

Intron Rank:

132534

Intron Class:

major

Intron Phase:

Intron Coordinates:

12081576 - 12081925

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TCTCCTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

83.8

0.76

0.7

78.9

26.6

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

0.37

1.8

72.26

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017428

12080473 - 12082335

1863