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Intron Name: Anas_platyrhynchos_platyrhynchos_2_120937500_120938125_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

120937500 - 120938125

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCAGCGCCG

5'SS Class:

weak_major

3'SS Sequence:

GCTGCTCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCGAA

U12 Branch Point Sequence:

GCTGCTCCAACA

Flanking Amino Acid:

QQQQQQRRRRRHGHGGSKKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.4

48.4

42.2

Major BPS

40.7

-0.5

1.3

29.8

35.9

Major PPT

65.1

0.34

58.5

37.2

Minor 5ss

25.4

-2.8

4.3

39.2

46.2

Minor BPS

-0.3

1.9

56.77

42.6

Associated Gene:

Gene:

BHLHE22

Ensembl Gene ID:

ENSAPLG00000029880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041638

120937282 - 120938591

1310