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Intron Name: Anas_platyrhynchos_platyrhynchos_2_120950316_120954301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120950316 - 120954301

Intron Length:

3986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCTGTTTTATTT

Flanking Amino Acid:

MDPEVYEDPKEYKFDRYIEN

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

87.9

0.85

0.8

85.4

34.1

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

53.6

0.19

1.7

70.13

42.3

Associated Gene:

Gene:

CYP7B1

Ensembl Gene ID:

ENSAPLG00000011556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012063

120950019 - 121067446

117428