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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121301157_121339715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121301157 - 121339715

Intron Length:

38559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGCAA

5'SS Class:

major

3'SS Sequence:

CTTTGCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTTTTTTGACC

Flanking Amino Acid:

AVSRVGSHPEGLIMPMGCGY

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.1

55.4

39.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

80.5

0.69

0.9

73.9

35.4

Minor 5ss

22.9

-3.1

3.2

28.9

43.5

Minor BPS

0.71

1.1

77.68

31.8

Associated Gene:

Gene:

ARMC1

Ensembl Gene ID:

ENSAPLG00000013027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013576

121300911 - 121365691

64781