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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121339849_121340422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121339849 - 121340422

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTTTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTACATGATT

Flanking Amino Acid:

QVVKSESGEEMLVPFQDTPV

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.3

0.5

70.3

44.5

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

0.46

1.8

85.36

34.5

Associated Gene:

Gene:

ARMC1

Ensembl Gene ID:

ENSAPLG00000013027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017953

121338926 - 121367839

28914

ENSAPLT00000013576

121300911 - 121365691

64781