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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121340700_121344439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121340700 - 121344439

Intron Length:

3740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTTTACTCATGG

Flanking Amino Acid:

VLHIDGLDDSSRRNLCEEAL

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

75.2

36.2

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

87.4

0.84

0.6

85.2

22.2

Minor 5ss

32.1

-2

3.1

40.3

45.6

Minor BPS

45.9

-0.4

2.2

60.67

46.7

Associated Gene:

Gene:

ARMC1

Ensembl Gene ID:

ENSAPLG00000013027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017953

121338926 - 121367839

28914

ENSAPLT00000013576

121300911 - 121365691

64781