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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121361400_121365454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121361400 - 121365454

Intron Length:

4055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCCTCTTTATTT

Flanking Amino Acid:

NPPVVHSALLALRYLAECRA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.3

0.73

0.7

81.4

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

63.1

0.49

1.6

74.81

43.2

Associated Gene:

Gene:

ARMC1

Ensembl Gene ID:

ENSAPLG00000013027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017953

121338926 - 121367839

28914

ENSAPLT00000013576

121300911 - 121365691

64781