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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121506802_121510697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121506802 - 121510697

Intron Length:

3896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

TTTTATGTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGT

Flanking Amino Acid:

GVTVSAQEPKRKLALKYHPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.5

0.55

1.1

75.5

38.3

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

61.2

0.43

1.9

82.72

39.3

Associated Gene:

Gene:

DNAJC5B

Ensembl Gene ID:

ENSAPLG00000013934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014518

121506068 - 121520058

13991