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Intron Name: Anas_platyrhynchos_platyrhynchos_2_12151637_12162703_F

Intron Information:

Intron Rank:

126735

Intron Class:

major

Intron Phase:

Intron Coordinates:

12151637 - 12162703

Intron Length:

11067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCAAC

5'SS Class:

major

3'SS Sequence:

CTCCTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATCAA

U12 Branch Point Sequence:

TCCTTTTTATAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

70.2

35.9

Major BPS

54.1

0.1

1.1

57.6

37.6

Major PPT

83.3

0.75

0.7

79.1

26.6

Minor 5ss

34.4

-1.8

2.9

39.8

40.4

Minor BPS

-0.2

1.7

51.11

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042942

12151445 - 12169153

17709