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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121541194_121549227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121541194 - 121549227

Intron Length:

8034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTATTTTAAACT

Flanking Amino Acid:

IIDIYKQESTRPERKCDQPM

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

67.8

0.64

1.6

83.9

37.2

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018294

121539269 - 121580149

40881

ENSAPLT00000014544

121539269 - 121578390

39122

ENSAPLT00000046028

121539269 - 121580149

40881