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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121551011_121554917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121551011 - 121554917

Intron Length:

3907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

AAATGATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTAACATAAACC

Flanking Amino Acid:

QLEETCKTVEECCRRQKEQL

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

63.2

0.3

54.5

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

53.7

0.1

69.59

41.2

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046028

121539269 - 121580149

40881

ENSAPLT00000018294

121539269 - 121580149

40881

ENSAPLT00000014544

121539269 - 121578390

39122