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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121556399_121558481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121556399 - 121558481

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TAATCTTCACCT

Flanking Amino Acid:

KIIREIDFDREEEVEEEEEE

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.7

0.51

0.8

70.4

30.7

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

55.6

0.25

1.8

74.35

42.3

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046028

121539269 - 121580149

40881

ENSAPLT00000018294

121539269 - 121580149

40881

ENSAPLT00000014544

121539269 - 121578390

39122