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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121558709_121560807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121558709 - 121560807

Intron Length:

2099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTGATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCTTTATCT

Flanking Amino Acid:

APQPAPPAGQDEVVTPSGSQ

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.6

37.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

61.1

0.25

1.2

64.4

40.9

Minor 5ss

39.5

-1.2

3.1

53.7

43.5

Minor BPS

73.4

0.81

1.5

87.39

38.7

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046028

121539269 - 121580149

40881

ENSAPLT00000014544

121539269 - 121578390

39122