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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121561096_121563341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121561096 - 121563341

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTCTTATTT

Flanking Amino Acid:

ESNATAATSKELAFCISLLA

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.4

0.8

0.7

80.4

31.3

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

68.9

0.67

1.5

82.89

39.2

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014544

121539269 - 121578390

39122