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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121561096_121578379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121561096 - 121578379

Intron Length:

17284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTTCCTTTACA

Flanking Amino Acid:

ESNATAATSKTGSEPSPQGR

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

100

1.24

0.5

100

Major PPT

85.4

0.8

0.7

79.3

26.3

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

70.6

0.64

1.6

75.18

42.3

Associated Gene:

Gene:

TRIM55

Ensembl Gene ID:

ENSAPLG00000013946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046028

121539269 - 121580149

40881