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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121658403_121660882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121658403 - 121660882

Intron Length:

2480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCAAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

QQRPAGGNVTGVGARVTATH

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

58.7

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

89.7

25.7

Minor 5ss

31.5

-2.1

3.1

40.2

45.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014301

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017416

121657205 - 121678714

21510

ENSAPLT00000028717

121657205 - 121678714

21510

ENSAPLT00000027446

121657205 - 121678714

21510