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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121707028_121708323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121707028 - 121708323

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

GTGCTGTTACTT

Flanking Amino Acid:

CNHQSDRKSLQPPSSLAIPI

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

78.2

0.63

0.8

70.1

35.9

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

44.2

-0.3

2.2

61.08

43.3

Associated Gene:

Gene:

VXN

Ensembl Gene ID:

ENSAPLG00000020243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022876

121691380 - 121711221

19842