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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121721948_121725898_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121721948 - 121725898

Intron Length:
3951

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCGGTATT

5'SS Class:
major

3'SS Sequence:
CTCTTTTATGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
ATCTTTTTAACG

Flanking Amino Acid:
FAEDSGLDVQSNCEWEAVVY

Intron Amino Acid Position:
723

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1.3
81.8
38.5

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
84
0.77
0.8
80.4
30.5

Minor 5ss
35.7
-1.6
3.1
51.1
45.4

Minor BPS
70.7
0.51
1.3
68.73
39.3

Associated Gene:

Gene:
MYBL1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121719340 - 121741601
22262