About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_121726207_121727929_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121726207 - 121727929

Intron Length:
1723

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGTGAT

5'SS Class:
major

3'SS Sequence:
TTAATTAACTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTAATTAACT

Flanking Amino Acid:
EKKYGPLKLTSQPLAFLEED

Intron Amino Acid Position:
649

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
74.4
35.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
65.1
0.34
1
64
41.5

Minor 5ss
40.9
-1
3.2
57.9
46.7

Minor BPS
74.8
0.86
1.7
94.75
31.4

Associated Gene:

Gene:
MYBL1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121719340 - 121741601
22262

121719340 - 121741601
22262