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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121731263_121732929_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121731263 - 121732929

Intron Length:
1667

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATTGT

5'SS Class:
strong_major

3'SS Sequence:
TTCAATTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAGTAAT

U12 Branch Point Sequence:
CTTTCTTCAATT

Flanking Amino Acid:
HASASANLVQQSFIDDDPDK

Intron Amino Acid Position:
328

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.9
81.2
33.8

Major BPS
76.6
0.66
1.1
75.9
36.3

Major PPT
83.3
0.75
0.8
80.6
36.5

Minor 5ss
41.3
-1
3
58.7
45.8

Minor BPS
70.2
0.71
1.5
83.73
37.9

Associated Gene:

Gene:
MYBL1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121719340 - 121741601
22262

121719340 - 121741601
22262