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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121757410_121760387_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

121757410 - 121760387

Intron Length:

2978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

CCTATCTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGAATAACT

Flanking Amino Acid:

VFYSIMKKTTGLADGKHCTF

Intron Amino Acid Position:

925

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.9

0.63

0.8

72.1

32.5

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

56.1

0.27

2.3

86.43

39.1

Associated Gene:

Gene:

VCPIP1

Ensembl Gene ID:

ENSAPLG00000014936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015564

121754897 - 121768332

13436