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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121760475_121765646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121760475 - 121765646

Intron Length:

5172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

TTGATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GAGTGCTTAATT

Flanking Amino Acid:

YSLCLLATLMGEDVWSYAKG

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

0.87

0.8

85.6

Major PPT

81.2

0.7

0.8

76.6

37.5

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

62.4

0.47

1.8

73.79

43.2

Associated Gene:

Gene:

VCPIP1

Ensembl Gene ID:

ENSAPLG00000014936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015564

121754897 - 121768332

13436