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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121841765_121842739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

121841765 - 121842739

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTTTC

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AATTTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

78.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.9

0.54

69.4

40.9

Minor 5ss

38.2

-1.3

3.1

52.1

45.1

Minor BPS

75.2

0.79

1.1

77.2

32.7

Associated Gene:

Gene:

MCMDC2

Ensembl Gene ID:

ENSAPLG00000015951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016641

121841734 - 121852497

10764