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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121850605_121851147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121850605 - 121851147

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

ACACTCTCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AGTTACTTAATA

Flanking Amino Acid:

QQFRTQDYEEFILFAKNLHV

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.41

0.9

37.4

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

71.1

0.66

1.4

75.95

34.7

Associated Gene:

Gene:

MCMDC2

Ensembl Gene ID:

ENSAPLG00000015951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016641

121841734 - 121852497

10764