Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_121858359_121860529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121858359 - 121860529

Intron Length:

2171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACGG

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTACAA

U12 Branch Point Sequence:

TGTTTGAGCACT

Flanking Amino Acid:

RGDGYLHPVKKWPMRSRLYI

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

57.3

47.4

Major BPS

52.2

0.06

34.9

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

-2.3

3.3

38.8

46.3

Minor BPS

39.8

-0.7

2.6

66.08

44.3

Associated Gene:

Gene:

TCF24

Ensembl Gene ID:

ENSAPLG00000022840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026501

121858245 - 121864379

6135