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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121876341_121880997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121876341 - 121880997

Intron Length:

4657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

GTATTAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTGTATTAATT

Flanking Amino Acid:

AADNQLKHMKDLEAVLNKWP

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

35.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.4

0.55

67.4

42.5

Minor 5ss

31.8

-2.1

3.1

40.4

45.3

Minor BPS

59.3

0.37

1.7

76.06

41.3

Associated Gene:

Gene:

PPP1R42

Ensembl Gene ID:

ENSAPLG00000015979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016669

121876091 - 121886325

10235

ENSAPLT00000016667

121876091 - 121887517

11427