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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121881115_121883244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121881115 - 121883244

Intron Length:

2130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

TCTGCTTTATTT

Flanking Amino Acid:

FDPRSLRSLAKSLSVLNISN

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

0.1

59.7

32.6

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

59.4

0.37

1.7

74.81

43.2

Associated Gene:

Gene:

PPP1R42

Ensembl Gene ID:

ENSAPLG00000015979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016669

121876091 - 121886325

10235

ENSAPLT00000016667

121876091 - 121887517

11427