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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121883384_121883753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121883384 - 121883753

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTATTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

ATGATGTTAAAT

Flanking Amino Acid:

NLSSLKNLEKLYLGGNYITV

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.3

39.3

Major BPS

77.3

0.68

81.5

Major PPT

89.4

0.89

0.7

88.1

28.8

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

48.2

-0

2.1

67.9

42.8

Associated Gene:

Gene:

PPP1R42

Ensembl Gene ID:

ENSAPLG00000015979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016669

121876091 - 121886325

10235

ENSAPLT00000016667

121876091 - 121887517

11427