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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121883921_121886110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121883921 - 121886110

Intron Length:

2190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

GTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

NLSDKNIDAIGDISLCRNLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

76.3

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.2

0.72

0.9

78.9

38.5

Minor 5ss

46.4

-0.4

3.2

71.4

39.7

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

PPP1R42

Ensembl Gene ID:

ENSAPLG00000015979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016669

121876091 - 121886325

10235