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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121898168_121898944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121898168 - 121898944

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCTTTCTCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTAGAATTAAAT

Flanking Amino Acid:

NTLSSSSLLTNADYTTGQVF

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.2

37.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

74.4

0.55

79.4

26.6

Minor 5ss

39.9

-1.1

2.8

57.3

39.7

Minor BPS

49.6

0.05

72.83

43.1

Associated Gene:

Gene:

COPS5

Ensembl Gene ID:

ENSAPLG00000016013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038955

121895005 - 121907866

12862

ENSAPLT00000020007

121889996 - 121907415

17420

ENSAPLT00000016717

121894732 - 121908242

13511