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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121899057_121901302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121899057 - 121901302

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

KIEDFGVHCKQYYALEVSYF

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

80.8

0.69

82.2

33.3

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

COPS5

Ensembl Gene ID:

ENSAPLG00000016013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038955

121895005 - 121907866

12862

ENSAPLT00000020007

121889996 - 121907415

17420

ENSAPLT00000016717

121894732 - 121908242

13511