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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121902934_121904146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121902934 - 121904146

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATATTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TGTTACATAACA

Flanking Amino Acid:

QFQEPFVAVVIDPTRTISAG

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

0.81

0.8

80.5

36.2

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

64.8

0.46

1.8

78.8

36.7

Associated Gene:

Gene:

COPS5

Ensembl Gene ID:

ENSAPLG00000016013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016717

121894732 - 121908242

13511

ENSAPLT00000038955

121895005 - 121907866

12862

ENSAPLT00000020007

121889996 - 121907415

17420