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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121904276_121906942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121904276 - 121906942

Intron Length:

2667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCACTGCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTTTCCTTCACT

Flanking Amino Acid:

MAAYIENAKQVGRLENAIGW

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

0.25

54.3

41.2

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

84.6

1.17

1.6

100

28.8

Associated Gene:

Gene:

COPS5

Ensembl Gene ID:

ENSAPLG00000016013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016717

121894732 - 121908242

13511

ENSAPLT00000020007

121889996 - 121907415

17420