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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121907178_121907248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121907178 - 121907248

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

CCCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

TGTGTCTGAGCG

Flanking Amino Acid:

EILAAKPWTKDHHYFKYCKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

53.2

38.4

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

80.7

0.69

0.7

72.1

32.5

Minor 5ss

26.6

-2.7

3.2

27.3

37.1

Minor BPS

47.9

-0.2

1.9

56.65

44.6

Associated Gene:

Gene:

COPS5

Ensembl Gene ID:

ENSAPLG00000016013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016717

121894732 - 121908242

13511

ENSAPLT00000020007

121889996 - 121907415

17420