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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121911981_121913268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121911981 - 121913268

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATGATGCAAACT

Flanking Amino Acid:

ENDPPYMEIRNKESEKLSET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.7

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

39.3

-0.7

2.4

59.02

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037021

121911877 - 121931254

19378

ENSAPLT00000016935

121911877 - 121932975

21099