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Intron Name: Anas_platyrhynchos_platyrhynchos_2_121971742_121972338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121971742 - 121972338

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

NEQRTALWKAGFKGKSKPNL

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.5

0.64

0.8

74.2

36.2

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034429

121967187 - 121985973

18787