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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122002139_122003154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122002139 - 122003154

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCAATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TATTTTGTATCT

Flanking Amino Acid:

YVNPNSQTTLGQEKPTEQDS

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.3

0.57

0.8

69.1

35.7

Minor 5ss

33.8

-1.8

3.2

45.3

43.7

Minor BPS

49.8

0.07

2.2

76.08

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001894

121991144 - 122059107

67964