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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122003730_122006765_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

122003730 - 122006765

Intron Length:

3036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTAC

5'SS Class:

strong_major

3'SS Sequence:

AAATGGTTCATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTCCTGAAAT

Flanking Amino Acid:

FKTHLKMQIEVFFKEIFLYI

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.6

31.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

58.3

0.19

50.3

42.9

Minor 5ss

39.4

-1.2

52.1

45.1

Minor BPS

72.5

0.79

1.5

86.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001894

121991144 - 122059107

67964