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Intron Name: Anas_platyrhynchos_platyrhynchos_2_122103347_122104193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

122103347 - 122104193

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

TTCACACTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TGTCTATGAATA

Flanking Amino Acid:

YEGRPLFVLKLGKRARPYKK

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

64.6

0.33

1.1

39.4

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

49.6

-0

1.7

63.74

35.9

Associated Gene:

Gene:

CPA6

Ensembl Gene ID:

ENSAPLG00000002961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003048

122078399 - 122158388

79990